transcription factor affinity prediction Search Results


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MolGen LLC transcription factor affinity prediction web tools
Candidate <t>transcription</t> factors prediction by <t>TRAP.</t> A. The search page and criteria of the TRAP program. The known 150-bp mouse Col10a1 cis-enhancer sequence was submitted in fasta format. B. The bioinformatics analysis of candidate TFs in TRAP. The candidate TFs with a P-value between 0.05 and 0.1 were sorted from lowest to highest P-value based on their binding affinity.
Transcription Factor Affinity Prediction Web Tools, supplied by MolGen LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Produced in rabbits immunized with a synthetic peptide corresponding to the C-terminus of the Human TUB/tubby bipartite transcription factor, and purified by antigen affinity chromatography.
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Candidate transcription factors prediction by TRAP. A. The search page and criteria of the TRAP program. The known 150-bp mouse Col10a1 cis-enhancer sequence was submitted in fasta format. B. The bioinformatics analysis of candidate TFs in TRAP. The candidate TFs with a P-value between 0.05 and 0.1 were sorted from lowest to highest P-value based on their binding affinity.

Journal: American Journal of Translational Research

Article Title: Stat5a promotes Col10a1 gene expression during chondrocyte hypertrophic differentiation

doi:

Figure Lengend Snippet: Candidate transcription factors prediction by TRAP. A. The search page and criteria of the TRAP program. The known 150-bp mouse Col10a1 cis-enhancer sequence was submitted in fasta format. B. The bioinformatics analysis of candidate TFs in TRAP. The candidate TFs with a P-value between 0.05 and 0.1 were sorted from lowest to highest P-value based on their binding affinity.

Article Snippet: A bioinformatics analysis of the 150-bp mouse Col10a1 cis-enhancer (-4296 to -4147 bp) was performed using the transcription factor affinity prediction (TRAP) web tools as previously described (http://trap.molgen.mpg.de/cgi-bin/trap_form.cgi) [ 39 ].

Techniques: Sequencing, Binding Assay